M. Wilhelms, G. Seemann, M. Weiser, and O. Dössel. Benchmarking Solvers of the Monodomain Equation in Cardiac Electrophysiological Modeling. In Biomedizinische Technik / Biomedical Engineering, vol. 55(s1) , pp. 99-102, 2010
The monodomain model is a mathematical description of the electrical excitation propagation in the heart. The numerical solution of this reaction-diffusion equation is a computationally demanding task. Aspects that have to be considered are the accuracy and stability of the solution on the one hand and the computing time on the other hand. Two first order methods an explicit and a semi-implicit scheme solving the monodomain equation were compared in this work. For the benchmark of the solvers, three cell models with different computational complexity were used. Thus, the contribution of the solvers to the total computing time could be analyzed. Generally, if the same time step was used, the semi-implicit was slower than the explicit one, since an additional linear system of equations had to be solved. However, the semi-implicit solver was more accurate and showed better stability behavior than the explicit one, especially at high spatial resolutions. Therefore, larger time steps could be used, achieving the same accuracy and a shorter total computing time as the explicit solver. However, this effect was present only, if the additional calculations of the semi-implicit solver contributed less to the total computing time, i.e. the cell model had to be computationally complex.